11/19/05

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Sabine Rech, Ph.D.

Associate Professor of Biology, Co-PI and Faculty Mentor of RUMBA  

Research Description

 

Marine organisms have been the source of a large number of unique biologically active compounds.  These novel molecules have been shown to have activities useful in the medical field (e.g. antibiotic and anticancer agents) as well as in industrial applications (e.g. halogenation enzymes).  Bromination is a chemical halogenation process important in manufacturing of a variety of substances including flame-retardants and antibacterial drugs.  Chemical bromination lacks specificity and results in the formation of undesirable byproducts.  In addition the elemental bromine necessary for this process is extremely toxic and a health hazard. Therefore brominating enzymes have become increasingly attractive. These enzymes have been isolated from marine algae as well as soil microorganisms such as Streptomyces sp.  High levels of halogenated substances are common and natural sources of these substances are marine organisms such as polychaete and hemichordate worms.  Hemichordate or acorn worms inhabit mucus-lined burrows in the sediment of shallow water.  High concentrations of brominated compounds have been found externally to the worms in the mucus lining these burrows. Therefore bacteria associated with the slime of the worms may play an important role in the production of the brominated aromatics. 

Proposed Undergraduate Role in the Investigation

The undergraduate students participating in RUMBA will serve a vital role in this investigation by screening and characterize bromoperoxidase activity in acorn worm isolates. RUMBA students will have the opportunity to develop and test their own ideas within the framework of this research. Examples of possible projects students can become interested in investigating are: (1) screening of acorn worm isolates for bromoperoxidase activity;  (2) characterization of positive isolates using biochemical tests and molecular approaches such as amplification of rRNA sequences;  (3) molecular screening of the bromoperoxidase-producing isolates for the presence of FADH2 dependent halogenase genes; and (4) cloning and expression of genes obtained.

 

 

 

Dr. Rech teaching an upper division microbiology class.

We began our studies of the bromination enzymes found in marine bacteria two years ago.  During the first year a group of four undergraduates in my laboratory were able to isolate 40 bacterial strains which were assigned to 30 separate groups based on their colony morphology.  During the past year the undergraduates started screening isolates for bromoperoxidase production. The screening involves the partial purification of the enzyme.  Streptomyces aureofaciens, a soil bacterium, which produces bromoperoxidase, is used as a positive control.  We have screened four isolates and two organisms have shown high bromoperoxidase activity when compared with the positive control.  Recent studies have shown that some bacterial haloperoxidases and perhydrolases are lacking halogenation specificity12.  However, it was demonstrated that the same strains also harbor FADH2 dependent halogenases, which are very specific.  

 

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This site was last updated 11/19/05